Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD65
Confidence96.80%DateThu Jan 5 11:20:07 GMT 2012
Rank95Aligned Residues60
% Identity27%Templatec3a3eB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:penicillin-binding protein 4; PDBTitle: crystal structure of penicillin binding protein 4 (dacb)2 from haemophilus influenzae, complexed with novel beta-3 lactam (cmv)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   258.260.........270.........280.........290.........300.........310.........320.........330.......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  LQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVA
Query Conservation 

   
  
    

 



  

 





 
 



             
         


    
 





  
 
Alig confidence 































.................................














Template Conservation                

 
 
  

  
   
 .................................     


  

 

Template Sequence  VSDLTQKLPEGSNAGVIAKNINQNQIIADYNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . STFMLPASTQKVFTA
Template Known Secondary structure  TTS
TT
TTTTST.................................T

B

GGGG
Template Predicted Secondary structure 











.................................





Template SS confidence 















































































   30.........40.........50.........60. ........70......
 
   338.340.........350..
Predicted Secondary structure 







Query SS confidence 














Query Sequence  VSALSAGVITRNTTL
Query Conservation   



 
        
Alig confidence 






..





Template Conservation   


  
..
 
 

Template Sequence  VAAKLAL. . GDQFQF
Template Known Secondary structure  T..
TT
Template Predicted Secondary structure 
..



Template SS confidence 














   77..80... ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions