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Job DescriptionP0AD65
Confidence99.95%DateThu Jan 5 11:20:07 GMT 2012
Rank37Aligned Residues380
% Identity12%Templatec2xftA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:orf12; PDBTitle: structural and mechanistic studies on a cephalosporin esterase from2 the clavulanic acid biosynthesis pathway
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  PYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVPPQA
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Template Sequence  PMGDAARWAMGLLTSSRPEDVAARFI. . . . . . . . . . . . . PTFNFAETVREW. RSKGPFTVRAYHPVAHKGWVVLSAPAGV
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TTB
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   28.30.........40.........50... ......60..... ....70.........80.........90...
 
   247..250.........260.........270.........280.........290.........300.........310.........320......
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Query Sequence  GHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVY
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Template Sequence  RYILSLTLDSSGLIRILTLK. . . PETVIPDMVTWNDVEETLHTPGVQHSVYAVRLTP. . . . . . . . DGHEVLHASAPERPM
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   101........110.........120 .........130.........140.........150.... .....160.........
 
   327..330.........340 .........350.........360.........370......... 380.........390.........400.
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Query Sequence  PPASTVKPYVAVSA. . . LSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLN. . VTRSLEESADTFFYQVAYDMGI
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Template Sequence  PTGAAYKLYLMRALVAEIEKGTVGWDEILTLTPELRSLPT. GDMQDLPDGTRVTVRETAHKMIALSDNTGADLVADRLGR
Template Known Secondary structure 
GGGTSS
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   170.........180.........190.........200......... 210.........220.........230.........240........
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
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Query Sequence  DRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKVP
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Template Sequence  EVVERSLAAAGHH. DPSLMRPFLTSHEV. . . . . . . . . . . . . . FELGWGDPERRAEWVRQDEAGRRELLEKMAGVMTVRGS
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   249250.........260. ........270..... ....280.........290.........300.........310...
 
   482....... 490.........500.........510.........520.........530.........540.........550.........560
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Query Sequence  HLLMSTAE. DGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYN
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Template Sequence  DLGATVHQLGIDWHMDAFDVVRVLEGLLQDSGRDTSGTVEEILTAYPGL. . LIDEERWRRVYFKAGSSPGV. . . . . . . . .
Template Known Secondary structure  G

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GGGT
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   314.....320.........330.........340.........350.........360.. .......370.........380..
 
   561........570.........580.........590..... ....600.........
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Query Sequence  AHKIAERLRDHKLMTAFAPYNNPQVAVAMILENGG. . . . . . AGPAVGTLMRQILD
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Template Sequence  . . . . . . . . . . . MMFCWLLQDHAGISYVLVLRQSADEQRLIGDGLFLRGIGAKIIE
Template Known Secondary structure  ...........TTS
SSGGGTTTS
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   383......390.........400.........410.........420......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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