Job Description P0AD65 Confidence 98.34% Date Thu Jan 5 11:20:07 GMT 2012 Rank 76 Aligned Residues 298 % Identity 12% Template c2wzzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: amp-c beta-lactamase (pseudomonas aeruginosa)in complex2 with compound m-03 Resolution 1.57 Å

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		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		L	D	L	K	L	Q	Q	Y	I	E	T	L	L	A	G	S	R	.	.	A	A	V	V	V	T	D	P	R	T	G	G	V	L	A	L	V	S	T	P	S	Y	D	P	N	L	F	V	D	G	I	S	S	K	D	Y	S	A	L	L	N	D	P	N	T	P	L	V	N	R	A	T	Q	G	V	Y	P	P	A	S	T
Query Conservation																			.	.
Alig confidence																			.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	A	L	V	D	A	A	V	Q	P	V	M	K	A	N	D	I	P	G	L	A	V	A	I	S	L	K	G	E	P	H	Y	F	S	Y	G	L	A	S	K	E	D	G	R	R	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	T	L	F	E	I	G	S	V
Template Known Secondary structure																	T	T		S									T	T									B	S		T	T	T			B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T						G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																							.	.	.	.	.	.	.	.	90	.
		332	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	P	Y	V	A	V	S	A	L	.	.	.	S	A	G	V	I	T	R	N	T	T	L	F	D	P	G	W	W	Q	L	P	G	S	E	K	R	Y	R	D	W	K	K	W	G	H	G	R	L	N	V	T	R	S	L	E	E	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.													.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	T	F	T	A	T	L	A	G	Y	A	L	T	Q	D	K	M	R	L	D	D	R	A	S	.	.	.	.	.	.	.	.	.	.	.	Q	H	W	P	A	L	Q	G	S	R	F	D	G	I	S	L	L	D	L	A	T	Y	T	A	G	G	L	P	L	Q	F	P	D	S	V	Q	K	D	Q	A	Q	I	R	D
Template Known Secondary structure																T	T	S			T	T	S	B	G	G	.	.	.	.	.	.	.	.	.	.	.	G	G		G	G	G	T	T	S	G	G	G	G		B						T	T		S	S				S	S			T	T			S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.												.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
																				389	390	.	.	.	.	.	.				.	.	.	400	.	.	.	.	.	.	.	.	.	410						.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.															.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.															.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	F	F	Y	Q	V	A	.	.	.	Y	D	M	G	I	D	R	L	S	E	W	M	G	K	.	.	.	.	.	F	G	Y	G	H	Y	T	G	I	D	L	A	E	E	R	S	G	N	M	P	T	R	E	W	K	Q	K	R	F	K	K	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.															.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.															.	.	.	.	.				.
Template Conservation																																																					.
Template Sequence		Y	Y	R	Q	W	Q	P	T	Y	A	P	G	S	Q	R	L	Y	S	N	P	S	I	G	L	F	G	Y	L	A	A	R	S	L	G	Q	P	F	E	R	L	M	E	Q	Q	V	F	P	A	L	G	L	.	E	Q	T	H	L	D	V	P	E	A	A	L	A	Q	Y	A	Q	G	Y	G	K	D	D	R	P	L	R	V
Template Known Secondary structure									S	S		T	T	T																				T	T	S									T					T	T		.	S	S			S	S			G	G	G	G	G	G	B				B		G	G	G		B
Template Predicted Secondary structure																																																					.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.						.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		W	Y	Q	G	D	T	I	P	V	G	I	G	Q	G	Y	W	T	A	T	P	I	Q	M	S	K	A	L	M	I	L	I	N	D	G	I	V	K	V	P	H	L	L	M	.	.	.	.	.	S	T	A	E	D	G	K	Q	V	P	W	V	Q	P	H	E	P	P	V	G	D	I	H	S	G	Y	W	E	L	A	K	D
Query Conservation																																													.	.	.	.	.
Alig confidence											.	.	.	.																															.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		G	P	G	P	L	D	A	E	G	.	.	.	.	Y	G	V	K	T	S	A	A	D	L	L	R	F	V	D	A	N	L	H	P	E	R	L	D	R	P	W	A	Q	A	L	D	A	T	H	R	G	Y	Y	K	V	G	D	M	T	Q	G	L	G	W	E	A	Y	D	W	P	I	S	L	K	R	L	Q	A	G	N	S
Template Known Secondary structure					T	T					.	.	.	.																				G	G	G	S										T	T	S							T	T					S	S						S	S										T	S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	Y	G	V	A	N	R	P	N	G	T	A	H	K	Y	F	A	S	A	P	Y	K	I	A	A	K	S	G	T	A	Q	V	F	G	L	K	A	N	E	T	Y	N	A	H	K	I	A	E	R	L	R	D	H	K	L	M	T	A	F	A	P	Y	N	N	P	Q	V	A	V	A	M	I	L	E	N	G	G	A	G
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		T	P	M	A	L	Q	P	H	R	I	A	R	L	P	A	P	Q	A	L	E	G	Q	R	L	L	N	K	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	N	G	F	G	A	Y	V	A	F	V	P	G	R	D	.	.	L	G	L	V	I	L	A	N	R	N	Y	P	N
Template Known Secondary structure							S															S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S									G	G	G	T	.	.								S	B
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.																					.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.
		598	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	V	G	T	L	M	R	Q	I	L	D	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	R	V	K	I	A	Y	A	I	L	S	G	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions