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Job DescriptionP0AD65
Confidence99.84%DateThu Jan 5 11:20:07 GMT 2012
Rank55Aligned Residues249
% Identity19%Templatec2v20A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase tem; PDBTitle: structure of a tem-1 beta-lactamase insertant2 allosterically regulated by kanamycin and anions. complex3 with sulfate.
Resolution1.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260........ .270.........280.........290.........300.........310.........320.........330....
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Query Sequence  QYIETLLAG. . . . . SRAAVVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP
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Template Sequence  KDAEDQLCRTSHRPCRVGYIELDLNSGKILESFRP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EERFPMMSTFKV
Template Known Secondary structure  TT

S

TTT

ST.................................TS

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   8.10.........20.........30.........40.. .......50....
 
   335....340.. .......350.........360.........370.........380.........390......... 400.........410
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Query Sequence  YVAVSALS. . . AGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDM. GIDRLSEWMGK
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Template Sequence  LLCGAVLSRIDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHN
Template Known Secondary structure  TTS

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   55....60.........70.........80.........90.........100.........110.........120.........130....
 
   411........420.........430.........440.........450.........460.........470.........480.........490
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Query Sequence  FGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAED
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Template Sequence  MGDHVTR. . . . . . . . . . . . . . . . . . . . . . . LDRWEPELNEAIPNDERDTTMPVAMATTLRKLLTG. . . . . . . . . . . . . . .
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   135....140. ........150.........160.........170......
 
   491........500.........510.........520.........530.........540.........550.........560.........570
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Query Sequence  GKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAERLRD
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Template Sequence  . . . . . . . . . . . . . . ELLTLASRQQLIDWMEADKVAGPLL. . RSALPAGWFIADKSGAGRRGS. . . . . . . . . . . . . . . . . .
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   177..180.........190.........200. ........210.........220..
 
   571....... .580.........590.........600. ........610....
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Query Sequence  HKLMTAFA. PYNNPQVAVAMILENGGAGPAVG. TLMRQILDHIMLG
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Template Sequence  . RGIIAALGPDGKPSRIVVIYTTGSRKKTDERNRQIAEIGASLIKH
Template Known Secondary structure  .STTS

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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