Job Description P0AD65 Confidence 99.88% Date Thu Jan 5 11:20:07 GMT 2012 Rank 50 Aligned Residues 239 % Identity 21% Template c2j7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tll2115 protein; PDBTitle: structure of pbp-a Resolution 1.90 Å

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		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		K	L	Q	Q	Y	I	E	T	L	L	A	G	S	R	A	.	.	.	A	V	V	V	T	D	P	R	T	G	G	V	L	A	L	V	S	T	P	S	Y	D	P	N	L	F	V	D	G	I	S	S	K	D	Y	S	A	L	L	N	D	P	N	T	P	L	V	N	R	A	T	Q	G	V	Y	P	P	A	S	T	V	K
Query Conservation																	.	.	.
Alig confidence																	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	Q	Q	Q	I	Q	Q	L	V	S	R	Q	P	N	L	T	A	G	L	Y	F	F	N	L	D	S	G	A	S	L	N	V	G	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	F	P	A	A	S	T	I	K
Template Known Secondary structure													S	S	T	T										T	T	T							B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					G	G	G	G
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																																			.	.	.	.	.	60	.	.	.	.
		334	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.
Predicted Secondary structure										.	.	.																																										.	.	.	.																			.
Query SS confidence										.	.	.																																										.	.	.	.																			.
Query Sequence		P	Y	V	A	V	S	A	L	.	.	.	S	A	G	V	I	T	R	N	T	T	L	F	D	P	G	W	W	Q	L	P	G	S	E	K	R	Y	R	D	W	K	K	W	G	H	G	R	L	N	V	T	R	.	.	.	.	S	L	E	E	S	A	D	T	F	F	Y	Q	V	A	Y	D	M	G	.	I	D	R	L	S
Query Conservation										.	.	.																																										.	.	.	.																			.
Alig confidence										.	.	.																																.	.	.								.	.	.	.																			.
Template Conservation																																												.	.	.
Template Sequence		F	P	I	L	V	A	F	F	K	A	V	D	E	G	R	V	T	L	Q	E	R	L	T	M	R	P	D	L	I	A	P	E	A	G	T	L	Q	Y	Q	K	P	N	.	.	.	S	Q	Y	A	A	L	E	V	A	E	L	M	I	T	I	S	D	N	T	A	T	N	M	I	I	D	R	L	G	G	A	A	E	L	N
Template Known Secondary structure														T	T	S	S		S	S	S						T	T	T				S	S		S	G	G	G	S		T	T	.	.	.															S													T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	M	G	K	F	G	Y	G	H	Y	T	G	I	D	L	A	E	E	R	S	G	N	M	P	T	R	E	W	K	Q	K	R	F	K	K	P	W	Y	Q	G	D	T	I	P	V	G	I	G	Q	G	Y	W	T	A	T	P	I	Q	M	S	K	A	L	M	I	L	I	N	D	G	I	V	K	V	P	H	L	L	M
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	F	Q	E	W	G	L	E	N	T	V	I	N	N	P	L	P	D	M	K	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	T	S	P	R	D	L	A	T	L	M	L	K	I	G	Q	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T		T	T		B			S		T	T		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																														.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	A	E	D	G	K	Q	V	P	W	V	Q	P	H	E	P	P	V	G	D	I	H	S	G	Y	W	E	L	A	K	D	G	M	Y	G	V	A	N	R	P	N	G	T	A	H	K	Y	F	A	S	A	P	Y	K	I	A	A	K	S	G	T	A	Q	V	F	G	L	K	A	N	E	T	Y	N	A	H	K	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	L	S	P	R	S	R	D	R	L	L	D	I	M	R	R	T	V	T	N	T	L	L	.	.	.	P	A	G	L	G	K	G	A	T	I	A	H	K	T	G	D	I	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S													T	S		S			S	S	G	.	.	.	G	G	G	S		T	T											S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		E	R	L	R	D	H	K	L	M	T	A	F	A	P	Y	N	N	.	P	Q	V	A	V	A	M	I	L	E	N	G	G	A	G	P	A	V	G	T	L	M	R	Q	I	L	D	H	I	M	L
Query Conservation																			.
Alig confidence		.	.	.	.	.	.												.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	V	G	D	A	G	M	V	D	M	P	N	G	Q	R	Y	V	A	A	M	M	V	K	R	P	Y	N	D	P	R	G	S	E	L	I	R	Q	V	S	R	M	V	Y	Q
Template Known Secondary structure		.	.	.	.	.	.										T	T	S												S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions