Job Description P0AD65 Confidence 96.22% Date Thu Jan 5 11:20:07 GMT 2012 Rank 100 Aligned Residues 282 % Identity 15% Template c1ei5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:d-aminopeptidase; PDBTitle: crystal structure of a d-aminopeptidase from ochrobactrum2 anthropi Resolution 1.90 Å

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		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		L	K	L	Q	Q	Y	I	E	T	L	L	A	G	S	R	.	.	A	A	V	V	V	T	D	P	R	T	G	G	V	L	A	L	V	S	T	P	S	Y	D	P	N	L	F	V	D	G	I	S	S	K	D	Y	S	A	L	L	N	D	P	N	T	P	L	V	N	R	A	T	Q	G	V	Y	P	P	A	S	T	V	K
Query Conservation																	.	.
Alig confidence																	.	.							.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	L	E	A	F	V	R	H	I	P	Q	N	Y	K	G	P	G	G	V	V	A	V	.	V	K	D	G	E	V	V	L	Q	H	A	W	G	F	A	D	L	R	T	R	T	P	M	T	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	M	P	I	C	S	V	S	K
Template Known Secondary structure										T					S		S	S							.			T	T													T	T	T	T					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G
Template Predicted Secondary structure																									.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																					.	.	.	.	60	.	.	.	.	.
		334	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.													.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.													.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Y	V	A	V	S	A	L	S	.	.	.	A	G	V	I	T	R	N	T	T	L	F	D	.	.	P	G	W	W	Q	L	P	G	S	E	K	R	Y	R	D	W	K	K	W	G	H	G	R	L	N	V	T	R	S	L	E	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.													.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.					.								.	.		.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.											.	.	.
Template Sequence		Q	F	T	C	A	V	L	L	D	A	V	G	E	P	E	L	.	L	D	D	A	L	E	A	Y	L	D	.	.	.	K	F	E	D	E	R	P	A	V	R	D	L	C	N	N	Q	S	G	L	R	D	Y	W	A	L	S	V	L	C	G	A	D	P	E	G	V	F	L	P	A	Q	A	Q	S	L	L	R	R	L	K
Template Known Secondary structure												T		S	G	G	G	.	G								T	T	.	.	.	T			S										T	T		S												T	T			T	T			B											T
Template Predicted Secondary structure																		.											.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
														388	.	390	.	.	.	.	.	.				.	.	.	400	.	.	.	.	.	.	.	.	.	410						.	.	.	.	.	.				.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.							.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.							.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	D	T	F	F	Y	Q	V	A	.	.	.	Y	D	M	G	I	D	R	L	S	E	W	M	G	K	.	.	.	.	.	F	G	Y	G	H	Y	.	.	.	T	G	I	D	L	A	E	E	R	S	G	N	M	P	T	R	E	W	K	Q	K	R	F	K	K	P	W	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.							.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.							.	.	.																		.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.
Template Sequence		T	T	H	F	E	P	G	S	H	Y	S	Y	C	N	G	N	F	R	I	L	A	D	L	I	E	A	H	T	G	R	T	L	V	D	I	L	S	E	R	I	F	A	P	A	G	M	K	R	A	E	L	I	S	D	T	A	L	F	D	E	C	T	G	Y	E	G	D	T	V	.	.	.	.	.	.	.	R	G	F	L
Template Known Secondary structure				S	S		T	T	S	S																				T	S										T					T		T	T						B	G	G	G			S	S							T	T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.			520	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		Q	G	D	T	I	P	V	G	I	G	Q	G	Y	W	T	A	T	P	I	Q	M	S	K	A	L	M	I	L	I	N	D	G	I	V	K	V	P	H	L	L	M	S	T	A	E	D	G	K	Q	V	P	W	V	Q	P	H	E	P	P	V	G	D	I	H	S	G	Y	W	E	L	A	K	D	G	M	.	.	Y	G	V
Query Conservation																																																																													.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	T	N	R	I	Q	W	M	G	D	A	G	I	C	A	S	L	N	D	M	I	A	W	E	Q	F	I	D	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	D	E	S	G	L	Y	R	R	L	S	G	P	Q	T	F	K	D	G
Template Known Secondary structure							B	B			S	S	S																			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		T	T	S						S	S			B		T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																														.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	R	P	N	G	T	A	H	K	Y	F	A	S	A	P	Y	K	I	A	A	K	S	G	T	A	Q	V	F	G	L	K	A	N	E	T	Y	N	A	H	K	I	A	E	R	L	R	D	H	K	L	M	T	A	F	A	P	Y	N	N	P	Q	V	A	V	A	M	I	L	E	N	G	G	A	G	P	A	V	G	T
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.									.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.									.	.	.
Template Sequence		V	A	A	P	Y	G	F	G	L	N	L	H	E	T	G	G	K	R	L	T	G	H	G	G	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	W	R	C	Q	R	W	H	C	A	D	E	R	.	.	L	S	T	I	A	M	F	N	.	.	.	F	E	G	G	A	S	E
Template Known Secondary structure			B		S			T	T							T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T									G	G	G	T	.	.								S	.	.	.	B	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.									.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.																					.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.				.	.	.	.	.	.	320
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	R	Q	I	L	D	H	I	M	L	G	D	N	N	T	D	L	P	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	F	K	L	M	N	I	A	L	G	V	S	S	S	E	V	S	R	V	E
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions