Return to main results Retrieve Phyre Job Id

Job DescriptionQ46801
Confidence23.69%DateThu Jan 5 12:34:24 GMT 2012
Rank124Aligned Residues25
% Identity12%Templatec3m63B_
PDB info PDB header:ligase/protein bindingChain: B: PDB Molecule:ubiquitin domain-containing protein dsk2; PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of dsk2
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.
Predicted Secondary structure 







Query SS confidence 
























Query Sequence  ITIECTINGMPFQLHAAPGTPLSEL
Query Conservation    
   


    
   
   

  
Alig confidence 
























Template Conservation 
 
 

         
    

  
Template Sequence  LNIHIKSGQDKWEVNVAPESTVLQF
Template Known Secondary structure 


SS



B


TTSB
Template Predicted Secondary structure 







Template SS confidence 
























   3......10.........20.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions