 |
| Job Description | P76196 | | Confidence | 59.11% | Date | Thu Jan 5 12:20:22 GMT 2012 |
| Rank | 139 | Aligned Residues | 26 |
| % Identity | 19% | Template | d1or7a1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma4 domain
|
| Resolution | 2.00 |
|
| | |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | |
|
|
| | | | | | | | |
|
|
|
|
| | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | R | H | I | F | A | M | T | I | D | E | C | A | T | W | I | A | Q | T | G | D | S | E | S | W | R | Q | W |
| Query Conservation | |
|
| | |
|
|
|
| | |
| |
| | |
|
| | |
| | | |
|
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | |
| |
| | |
|
|
| | |
|
| . | . | |
| | |
|
| | | |
| Template Sequence | |
L | R | E | L | D | G | L | S | Y | E | E | I | A | A | I | M | D | . |
. |
C | P | V | G | T | V | R | S | R |
| Template Known Secondary structure | |
| | | T | T |
|
|
| | | | | | | | T | T | . | . | S |
| | | | | | | |
| Template Predicted Secondary structure | |
| | | |
|
|
|
| | | | | | | | |
| . | . |
|
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
. | . | . | . | . | 170 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
