 |
Job Description | P76196 | Confidence | 82.48% | Date | Thu Jan 5 12:20:22 GMT 2012 |
Rank | 68 | Aligned Residues | 42 |
% Identity | 21% | Template | c3mkyP_ |
PDB info |
PDB header:dna binding protein/dna | Chain: P: PDB Molecule:protein sopb; |
PDBTitle: structure of sopb(155-323)-18mer dna complex, i23 form
|
Resolution | 2.86 Å |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | L | R | H | I | F | A | M | T | I | D | E | C | A | T | W | I | A | Q | T | G | D | S | E | S | W | R | Q | W | E | N | G | K | C | A | I | P | D | R | V | V | E | Q | L |
Query Conservation |   |
|
|
|
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|
|   |
|   |   |
|
|
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |
| . | . |   |
|
|
|   |
|
|   |   |
|   |
|   | . |   |
|
|   |   |
|   |   |   |   |
Template Sequence |   |
S | R | L | Q | N | E | F | A | G | N | I | S | A | L | A | D | A | E | N | . |
. |
I | S | R | K | I | I | T | R | C | I | N | T | A | . |
K | L | P | K | S | V | V | A | L | F |
Template Known Secondary structure |   |
 |  |  |  | T | T | T | T | T |
|  |  |  |  |  |  |  |  | T | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  | . | T | S |
|  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
. | . | . | . | . | . | . | . | . | 210 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|