Return to main results Retrieve Phyre Job Id

Job DescriptionP76196
Confidence20.85%DateThu Jan 5 12:20:22 GMT 2012
Rank262Aligned Residues17
% Identity12%Templatec2vi6F_
PDB info PDB header:transcriptionChain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30......
Predicted Secondary structure 




Query SS confidence 


















Query Sequence  DECATWIAQTGDSESWRQW
Query Conservation   
 
  

  
   

 

Alig confidence 







..








Template Conservation    

  

..
    
  
Template Sequence  QELSSILN. . LSYKQVKTW
Template Known Secondary structure  T..

Template Predicted Secondary structure 
..

Template SS confidence 


















   32....... 40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions