Job Description P76196 Confidence 54.12% Date Thu Jan 5 12:20:22 GMT 2012 Rank 149 Aligned Residues 30 % Identity 17% Template c1or7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma-e factor; PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Q	A	L	R	H	I	F	A	M	T	I	D	E	C	A	T	W	I	A	Q	T	G	D	S	E	S	W	R	Q	W
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		M	A	I	T	L	R	E	L	D	G	L	S	Y	E	E	I	A	A	I	M	D	.	.	C	P	V	G	T	V	R	S	R
Template Known Secondary structure									T	T											T	T	.	.	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions