Job Description P76196 Confidence 27.70% Date Thu Jan 5 12:20:22 GMT 2012 Rank 236 Aligned Residues 36 % Identity 25% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.							.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		M	N	A	Y	E	L	Q	A	L	R	H	I	F	A	.	.	.	.	.	.	M	T	I	D	E	C	A	T	W	I	A	Q	T	G	D	S	E	S	W	R	Q	W	E	N
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.												.	.
Template Conservation																																	.	.
Template Sequence		L	S	E	R	E	A	M	V	L	K	L	R	K	G	L	I	D	G	R	E	H	T	L	E	E	V	G	A	Y	F	G	.	.	V	T	R	E	R	I	R	Q	I	E	N
Template Known Secondary structure		S		T	T	T	T					T	T	S	S	T	T	S	S										T	T	S		.	.	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.			.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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