Job Description P76196 Confidence 65.72% Date Thu Jan 5 12:20:22 GMT 2012 Rank 119 Aligned Residues 52 % Identity 8% Template c1ic8B_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:hepatocyte nuclear factor 1-alpha; PDBTitle: hepatocyte nuclear factor 1a bound to dna : mody3 gene2 product Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Q	A	L	R	H	I	F	A	M	T	I	D	E	C	A	T	W	I	A	Q	T	G	D	S	E	S	W	R	Q	W	E	N	G	K	C	A	I	P	D	R	V	V	E	Q	L	L	A	M	R	Q	Q	R
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		M	V	K	S	Y	L	Q	Q	H	N	I	P	Q	R	E	V	V	D	T	T	G	.	.	L	N	Q	S	H	L	S	Q	H	L	N	K	G	T	P	M	K	T	Q	K	R	A	A	L	Y	T	W	Y	V	R	K
Template Known Secondary structure										T	T												.	.												S
Template Predicted Secondary structure																							.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions