Job Description P76196 Confidence 75.06% Date Thu Jan 5 12:20:22 GMT 2012 Rank 90 Aligned Residues 36 % Identity 8% Template c1hf0A_ PDB info PDB header:transcription factor Chain: A: PDB Molecule:octamer-binding transcription factor 1; PDBTitle: crystal structure of the dna-binding domain of oct-1 bound2 to dna as a dimer Resolution 2.7 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		E	L	Q	A	L	R	H	I	F	A	M	T	I	D	E	C	A	T	W	I	A	.	.	.	.	Q	T	G	D	S	E	S	W	R	Q	W	E	N	G	K
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.
Template Conservation
Template Sequence		T	F	K	Q	R	R	I	K	L	G	F	T	Q	G	D	V	G	L	A	M	G	K	L	Y	G	N	D	F	S	Q	T	T	I	S	R	F	E	A	L	N
Template Known Secondary structure										T	T														S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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