Job Description P76196 Confidence 63.63% Date Thu Jan 5 12:20:22 GMT 2012 Rank 129 Aligned Residues 33 % Identity 27% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		M	N	A	Y	E	L	Q	A	L	R	H	I	F	.	A	M	T	I	D	E	C	A	T	W	I	A	Q	T	G	D	S	E	S	W	R	Q
Query Conservation															.
Alig confidence															.													.	.
Template Conservation																												.	.
Template Sequence		L	D	P	K	E	A	T	Y	L	R	W	I	A	V	G	K	T	X	E	E	I	A	D	V	E	G	.	.	V	K	Y	N	S	V	R	V
Template Known Secondary structure														T	T	T										T	T	.	.
Template Predicted Secondary structure																												.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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