Job Description P0ACR2 Confidence 93.42% Date Thu Jan 5 11:18:47 GMT 2012 Rank 169 Aligned Residues 70 % Identity 9% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																		.																																			.
Query SS confidence																		.																																			.
Query Sequence		W	S	E	Y	S	L	E	V	V	D	A	V	A	R	N	G	.	S	F	S	A	A	A	Q	E	L	H	R	V	P	S	A	V	S	Y	T	V	R	Q	L	E	E	W	L	A	V	P	L	F	E	R	.	R	H	R	D	V	E	L	T	A	A	G	A	W	F	L	K	E	G	R	S
Query Conservation																		.																																			.
Alig confidence																		.																																			.
Template Conservation
Template Sequence		L	P	D	S	T	R	Q	R	I	V	E	L	A	H	S	G	A	R	P	C	D	I	S	R	I	L	Q	V	S	N	G	C	V	S	K	I	L	G	R	Y	Y	A	T	G	S	I	R	P	R	A	I	G	G	S	K	P	R	V	A	T	P	E	V	V	S	K	I	A	Q	Y	K	Q
Template Known Secondary structure																T	T											T																	S			S					S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions