Job Description P0ACR2 Confidence 99.75% Date Thu Jan 5 11:18:47 GMT 2012 Rank 13 Aligned Residues 203 % Identity 17% Template c3oxnD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: the crystal structure of a putative transcriptional regulator from2 vibrio parahaemolyticus Resolution 2.70 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	W	R	G	Q	L	A	I	A	V	D	N	I	V	R	P	E	R	T	R	Q	M	I	V	D	F	Y	R	H	F	D	D	V	E	L	L	V	F	Q	E	V	F	N	G	V	W	D	A	L	S	D	G	R	V	E	L	A	I	G	A	T	R	A	I	P	V	G	G	R	Y	A	F	R	D	M	G	M	L
Query Conservation
Alig confidence																																																																				.	.
Template Conservation																																																																				.	.
Template Sequence		P	Q	Q	C	D	Q	T	F	T	I	A	T	T	D	Y	A	X	Q	T	I	L	P	F	A	L	P	R	I	Y	Q	E	A	P	N	V	S	F	N	F	L	P	L	Q	H	D	R	L	S	D	Q	L	T	Y	E	G	A	D	L	A	I	C	R	P	T	G	P	.	.	V	E	P	L	R	S	E	I	L	G	R	V
Template Known Secondary structure				S																T														T	T										G	G	G							T	S			S							S	S		.	.		T	T	S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		S	W	S	C	V	V	A	S	H	H	P	L	A	L	M	D	G	P	F	S	D	D	T	L	R	N	W	P	S	L	V	R	E	D	T	S	R	T	L	P	K	R	I	T	W	L	L	D	.	.	.	N	Q	K	R	V	V	V	P	D	W	E	S	S	A	T	C	I	S	A	G	L	C	I	G	M	V	P	T	H
Query Conservation																																																		.	.	.
Alig confidence															.	.																																		.	.	.
Template Conservation															.	.
Template Sequence		G	V	L	C	L	L	S	K	Q	H	P	L	A	.	.	N	Q	E	X	S	L	D	D	Y	L	S	H	P	H	A	X	I	A	I	S	D	G	V	K	A	L	I	E	Q	A	L	I	D	K	P	Q	R	K	X	V	L	R	A	Y	H	L	E	A	A	L	A	I	V	D	T	L	P	I	I	I	T	V	P	A	D
Template Known Secondary structure									T	T	S	G	G	G	.	.	S	S										S						S													T	S	S	S										S										T	T	S
Template Predicted Secondary structure															.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		F	A	K	P	W	L	N	E	G	K	W	V	A	L	E	L	E	N	P	F	P	D	S	A	C	C	L	T	W	Q	Q	N	.	D	M	S	P	A	L	T	W	L	L	E	Y	L	G	D	S	E	T
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		L	A	Y	L	V	A	E	R	Y	D	L	V	V	K	P	L	P	F	Q	F	T	P	F	D	Y	S	X	I	W	H	A	R	C	E	H	S	P	A	Q	E	W	L	R	S	V	V	R	E	E	C	S
Template Known Secondary structure											T							S	S													G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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