Job Description P0AEB0 Confidence 1.31% Date Thu Jan 5 11:22:55 GMT 2012 Rank 61 Aligned Residues 94 % Identity 11% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	N	I	R	W	A	L	L	Y	G	V	V	L	T	N	A	R	A	I	G	E	F	G	A	V	S	V	V	S	G	S	I	R	G	E	T	L	S	L	P	L	Q	I	E	L	L	E	Q	D	Y	N	T	V	G	S	F	T	A	A	A	L	L	T	L	M	A	I	I	T	L	F	L	K	S	M	L	Q	W	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L
Template Known Secondary structure																				T	T		S	S	S					G	G	G																T	T			B
Template Predicted Secondary structure
Template SS confidence
		873	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	N	Q	E	K	R	A	Q	Q	E	E	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	K	E	G	K	G	L	I	E	A	T	L	D
Template Known Secondary structure		T	T	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		953	.	.	.	.	.	.	960	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions