Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEB0
Confidence4.94%DateThu Jan 5 11:22:55 GMT 2012
Rank33Aligned Residues160
% Identity11%Templatec3mkuA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:multi antimicrobial extrusion protein (na(+)/drug PDBTitle: structure of a cation-bound multidrug and toxin compound extrusion2 (mate) transporter
Resolution4.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVN
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Template Sequence  VGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYT. . . . . . . . . . ENQVVVALAMQLLLFAAIYQCMD
Template Known Secondary structure  GGGSS


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   302.......310.........320.........330.........340........ .350.........360.........370.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  LVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF
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Template Sequence  AVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGF. . . . . . . . . . . WLGFIIGLSAAALML
Template Known Secondary structure  GGGSSSSS

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   372.......380.........390.........400.........410.........420..... ....430.........440
 
   161........170.........180.
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Query Sequence  VVRELVPVMLSQGSQEDEAAI
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Template Sequence  GQRLYWLQKQSDDVQLHLAAK
Template Known Secondary structure  GGGSTTT

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   441........450.........460.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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