Job Description P0AEB0 Confidence 1.09% Date Thu Jan 5 11:22:55 GMT 2012 Rank 85 Aligned Residues 103 % Identity 10% Template c3eamB_ PDB info PDB header:membrane protein, transport protein Chain: B: PDB Molecule:glr4197 protein; PDBTitle: an open-pore structure of a bacterial pentameric ligand-2 gated ion channel Resolution 2.90 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	F	R	R	V	T	L	P	N	I	R	W	A	L	L	Y	G	V	V	L	T	N	A	R	A	I	G	E	F	G	A	V	S	V	V	S	G	S	I	R	G	E	T	L	S	L	P	L	Q	I	E	L	L	E	Q	D	Y	N	T	V	G	S	F	T	A	A	A	L	L	T	L	M	A	I	I	T	L	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	Y	F	S	Y	I	P	N	I	I	L	P	M	L	F	I	L	F	I	S	W	T	A	F	W	S	T	S	Y	E	A	N	V	T	L	V	V	S	T	L	I	A	H	I	A	F	N	I	L	V	E	T	N	L	P	K	T	P	Y	M	T	Y	T	G	A	I	I	F	M	I	Y	L	F	Y	F	V	A	V	I
Template Known Secondary structure					T	T					T													G	G	G	G																												T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	M	L	Q	W	R	L	E	N	Q	E	K	R	A	Q	Q	E	E	H	H	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	T	V	Q	H	Y	L	K	V	E	S	Q	P	A	R	A	A	S	I	T	R	A
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions