Return to main results Retrieve Phyre Job Id

Job DescriptionA5PFJ9
Confidence3.48%DateThu Jan 5 10:55:35 GMT 2012
Rank99Aligned Residues55
% Identity20%Templated1l8qa1
SCOP infoDNA/RNA-binding 3-helical bundle TrpR-like Chromosomal replication initiation factor DnaA C-terminal domain IV
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31...... ..40......... 50.........60.........70.........80......
Predicted Secondary structure 

...




..









Query SS confidence 






. . .











. .




































Query Sequence  HALLDCK. . . TLTLTELGRNLP. . TKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFIC
Query Conservation    
    ... 
 
  
   
 ..      
 


  


 
  
                
Alig confidence 






...











..













.





















Template Conservation 




 
  
  

  

  

 





  
  


 .  
      
  
  

     
Template Sequence  IAXYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEE. EKKRKFKHLVGFLEKQAFDKIC
Template Known Secondary structure 


SS


ST.TT



Template Predicted Secondary structure 







.
Template SS confidence 




























































   338.340.........350.........360.........370..... ....380.........390.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions