Job Description A5PFJ9 Confidence 5.58% Date Thu Jan 5 10:55:35 GMT 2012 Rank 36 Aligned Residues 54 % Identity 17% Template c3qp5C_ PDB info PDB header:transcription Chain: C: PDB Molecule:cvir transcriptional regulator; PDBTitle: crystal structure of cvir bound to antagonist chlorolactone (cl) Resolution 3.25 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		L	H	D	S	L	Y	Q	F	C	P	E	L	H	L	K	R	L	N	S	L	T	L	A	C	H	A	L	L	D	C	K	T	L	T	L	T	E	L	G	R	N	L	P	.	T	K	A	R	T	K	H	N	I	K	R	I	D	R	L	L	G
Query Conservation																																													.
Alig confidence																											.	.	.	.	.	.													.
Template Conservation																											.	.	.	.	.	.
Template Sequence		L	H	Q	A	A	I	R	V	A	N	L	L	S	Q	R	E	Y	D	I	F	H	W	M	S	R	.	.	.	.	.	.	G	K	T	N	W	E	I	A	T	I	L	D	I	S	E	R	T	V	K	F	H	V	A	N	V	I	R	K	L	N
Template Known Secondary structure																									T	T	.	.	.	.	.	.	T											T																		T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions