Job Description A5PFJ9 Confidence 4.57% Date Thu Jan 5 10:55:35 GMT 2012 Rank 56 Aligned Residues 48 % Identity 13% Template c3cuqD_ PDB info PDB header:protein transport Chain: D: PDB Molecule:vacuolar protein-sorting-associated protein 25; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.61 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	C	P	E	L	H	L	K	R	L	N	S	L	T	L	A	C	H	A	L	L	D	C	K	T	L	T	L	T	E	L	G	R	N	L	P	T	K	A	R	T	K	H	N	I	K	R	I	D	R	L	L	G	N	R	H	L	H	K
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	P	N	V	D	T	R	Q	K	Q	L	A	A	W	C	S	L	V	L	S	F	C	R	L	H	K	Q	S	S	M	T	V	M	E	A	Q	E	S	P	.	.	.	.	.	.	.	.	.	.	.	.	L	F	N	N	V	K	L	Q	R
Template Known Secondary structure			S	S																			T	T	T	S					B							T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B		S	S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.													.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions