Return to main results Retrieve Phyre Job Id

Job DescriptionA5PFJ9
Confidence9.80%DateThu Jan 5 10:55:35 GMT 2012
Rank13Aligned Residues73
% Identity8%Templatec2qkkI_
PDB info PDB header:hydrolase/dna/rnaChain: I: PDB Molecule:ribonuclease h1; PDBTitle: human rnase h catalytic domain mutant d210n in complex with2 14-mer rna/dna hybrid
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150.... .....160.
Predicted Secondary structure 


























.
Query SS confidence 

































































.






Query Sequence  NTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNT. TPLIVSD
Query Conservation       
 

 
          
  

   





 
  
              
  
   

   . 





Alig confidence 

































































.






Template Conservation   
 
 





           
                     

  


 

  

            
 

Template Sequence  GDFVVVYTDGCCSSNGRRRPRAGIGVYWGPGHPLNVGIRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTN
Template Known Secondary structure 
SS

TSSSSS



STT
TT
B




SS

TTT


Template Predicted Secondary structure 




























Template SS confidence 









































































   137..140.........150.........160.........170.........180.........190.........200.........210
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions