Job Description P25743 Confidence 9.01% Date Thu Jan 5 11:42:30 GMT 2012 Rank 7 Aligned Residues 120 % Identity 9% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		T	A	N	L	S	V	A	I	I	L	W	I	S	L	F	L	G	D	T	I	L	Q	L	F	G	I	S	I	D	S	F	R	I	A	G	G	I	L	V	V	T	I	A	M	S	.	M	I	S	G	K	L	G	E	D	K	Q	N	K	Q	E	K	S	E	T	A	V	R	E	S	I	G	V	V	P	L	A	L	P	L
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I
Template Known Secondary structure		S					G	G	G																T	T			B																														T	T	S	S				T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		896	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	G	P	G	A	I	S	S	T	I	V	W	G	T	R	Y	H	S	I	S	Y	L	F	G	F	F	V	A	I	A	L	F	A	L	C	C	W	G	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V
Template Known Secondary structure																	T	T		S	S	S																				T
Template Predicted Secondary structure
Template SS confidence
		976	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions