Job Description P25743 Confidence 19.47% Date Thu Jan 5 11:42:30 GMT 2012 Rank 4 Aligned Residues 86 % Identity 12% Template c2vv5D_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs Resolution 3.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	Y	F	K	F	F	I	G	L	F	A	L	V	N	P	V	G	I	I	P	V	F	I	S	M	T	S	Y	Q	T	A	A	A	R	N	K	T	N	L	T	A	N	L	S	V	A	I	I	L	W	I	S	L	F	L	G	D	T	I	L	Q	L	F	G	I	S	I	D	S	F	R	I	A	G	G	I	L	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	A	V	N	I	V	A	A	L	A	I	I	I	V	G	L	I	I	A	R	M	I	S	N	A	V	N	R	L	M	I	S	R	K	I	D	A	T	V	A	D	F	L	S	A	L	V	R	Y	G	I	I	A	F	T	L	I	A	A	L	G	R	V	G	V	Q	T	A	S	V	I	A	V	L	G	A	A	G	L
Template Known Secondary structure		G	G	G	S																																S																											T	T	T			S	T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		89	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	A	M	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	G	L	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions