Job Description P25743 Confidence 1.39% Date Thu Jan 5 11:42:30 GMT 2012 Rank 79 Aligned Residues 92 % Identity 8% Template c2jlnA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	K	L	G	E	D	K	Q	N	K	Q	E	K	S	E	T	A	V	R	E	S	I	G	V	V	P	L	A	L	P	L	M	A	G	P	G	A	I	S	S	T	I	V	W	G	T	R	Y	H	S	I	S	Y	L	F	G	F	F	V	A	I	A	L	F	A	L	C	C	W	G	L	F	R	M	A	P	W	L	V
Query Conservation
Alig confidence																																																				.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		E	A	R	S	L	L	N	P	S	N	A	P	T	R	Y	A	E	R	S	V	G	P	F	S	L	A	A	I	W	F	A	M	A	I	Q	V	A	I	F	I	A	A	G	Q	M	T	S	S	F	Q	.	.	.	.	V	W	Q	V	I	V	A	I	A	A	G	C	T	I	A	V	I	L	L	F	F	T	Q	S	A	A
Template Known Secondary structure					B				S	T	T	S				G	G	G			B															S	T										T	T	T	S		.	.	.	.																							T
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	R	Q	T	G	I	N	V	I	T	R	I	M	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	W	G	I	N	F	T	V	A	A	R	M	P	F	G
Template Known Secondary structure												T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions