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Job DescriptionP25743
Confidence1.79%DateThu Jan 5 11:42:30 GMT 2012
Rank50Aligned Residues103
% Identity12%Templatec2bl2F_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:v-type sodium atp synthase subunit k; PDBTitle: the membrane rotor of the v-type atpase from enterococcus2 hirae
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  ETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIM
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Template Sequence  SQPEKFGQALILQLLPGTQGLYGFVIAFLIFINLGSDMSVVQ. GLNFLGASLPIAFTGLFSGIAQGKVAAAGIQILAKKP
Template Known Secondary structure  T
GGGGGGT

TT

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G
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   47..50.........60.........70.........80........ .90.........100.........110.........120.....
 
   191........200.... .....210....
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Query Sequence  GLLLMALGIEFIVT. . GIKGIFPGLL
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Template Sequence  EHATKGIIFAAMVETYAILGFVISFL
Template Known Secondary structure  GGTT
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   126...130.........140.........150.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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