Job Description P27300 Confidence 95.53% Date Thu Jan 5 11:43:46 GMT 2012 Rank 33 Aligned Residues 136 % Identity 16% Template c3nxsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:lao/ao transport system atpase; PDBTitle: crystal structure of lao/ao transport system from mycobacterium2 smegmatis bound to gdp Resolution 2.30 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		K	R	A	W	R	A	P	V	P	V	V	V	V	G	N	L	T	A	G	G	N	G	K	T	P	V	V	V	W	L	V	E	Q	L	Q	Q	R	G	I	R	V	G	V	V	S	R	.	G	Y	G	G	K	A	E	S	Y	P	L	L	L	S	A	D	T	T	T	A	Q	A	G	D	E	P	V	L	I	Y	Q	R	T
Query Conservation																																																.
Alig confidence															.	.																																.																														.	.	.	.
Template Conservation															.	.																																																														.	.	.	.
Template Sequence		L	M	P	E	A	G	S	A	M	H	V	G	I	.	.	T	G	V	P	G	V	G	K	S	T	T	I	E	A	L	G	M	H	L	I	E	A	G	H	R	V	A	V	L	A	V	D	R	M	A	R	L	A	V	H	P	D	A	Y	I	R	P	S	P	T	S	G	T	L	G	G	V	A	K	A	T	.	.	.	.
Template Known Secondary structure		T	T	T	T	T	T		S						.	.				T	T	S																T	T																		T	T										S										.	.	.	.
Template Predicted Secondary structure															.	.																																																														.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		D	A	P	V	A	V	S	P	V	R	S	D	A	V	K	A	I	L	A	Q	H	P	D	V	Q	I	I	V	T	D	D	G	L	Q	H	Y	R	L	A	R	.	.	.	.	.	D	V	E	I	V	V	I	D	G	V	R	R	F	G	N	G	W	W	L	P	A	G	P	M	R	E	R	A	G	R	L	K	S	V	D
Query Conservation																																										.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.											.	.																			.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.											.	.																																											.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	R	E	T	I	V	L	L	E	A	A	.	.	G	Y	D	V	I	L	V	E	T	V	G	V	G	Q	S	E	V	T	V	A	G	M	V	D	T	F	V	F	L	T	L	A	R	T	G	D	Q	L	Q	G	I	K	.	.	.	.	.	.	.	.	K	G	V	L	E	L	A	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.										T	.	.	T												T	T							T	T		S									S	S	S	S							.	.	.	.	.	.	.	.	T	T		G	G	G		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.											.	.																																											.	.	.	.	.	.	.	.
Template SS confidence
												136	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.
		193	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	V	N	G	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	V	V	N	K	A	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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