Job Description P27300 Confidence 38.56% Date Thu Jan 5 11:43:46 GMT 2012 Rank 425 Aligned Residues 100 % Identity 13% Template c3kv1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri Resolution 1.70 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																					.
Query SS confidence																							.	.	.																					.
Query Sequence		R	A	P	V	P	V	V	V	V	G	N	L	T	A	G	G	N	G	K	T	P	.	.	.	V	V	V	W	L	V	E	Q	L	Q	Q	R	G	I	R	V	G	V	V	S	.	R	G	Y	G	G	K	A	E	S	Y	P	L	L	L	S	A	D	T	T	T	A	Q	A	G	D	E	P	V	L	I	Y	Q	R	T	D
Query Conservation																							.	.	.																					.
Alig confidence																							.	.	.																					.							.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		K	A	E	F	A	L	V	G	I	G	D	X	D	E	N	S	H	X	V	K	L	G	F	F	T	P	K	E	F	V	E	A	R	L	N	D	G	I	V	G	D	I	G	G	F	D	F	F	K	L	D	.	.	.	.	G	T	D	A	D	T	L	X	R	G	R	V	I	G	L	E	X	E	D	L	R	Q	I	P	N
Template Known Secondary structure		T		S													T					T	T	S	S											T	T							T	T	T					T	T	.	.	.	.	S		B				G	G	G	G	G	B		B								T	S	S
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
			119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	P	V	A	V	S	P	V	R	S	D	A	V	K	A	I	L	A	Q	H	P	D	V	Q	I	I	V	T	D
Query Conservation		.
Alig confidence		.																						.
Template Conservation																								.
Template Sequence		V	V	A	X	A	S	E	S	R	K	A	L	S	I	X	G	A	L	R	T	G	V	.	I	D	V	L	A	T	S
Template Known Secondary structure									G	G	G										T	S		.		S
Template Predicted Secondary structure																								.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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