Job Description P27300 Confidence 97.07% Date Thu Jan 5 11:43:46 GMT 2012 Rank 9 Aligned Residues 89 % Identity 28% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	A	W	R	A	P	V	P	V	V	V	V	G	N	L	T	A	G	G	N	G	K	T	P	V	V	V	W	L	V	E	Q	L	Q	Q	R	G	I	R	V	G	V	V	S	R	G	Y	G	G	K	A	E	S	Y	P	L	L	L	S	A	D	T	T	T	A	Q	A	G	D	E	P	V	L	I	Y	Q	R	T	D
Query Conservation
Alig confidence																.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	I	K	E	K	P	T	I	L	L	M	V	G	.	.	.	I	Q	G	S	G	K	T	T	T	V	A	K	L	A	R	Y	F	Q	K	R	G	Y	K	V	G	V	V	C	S	D	T	W	R	P	G	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	L	R	Q	L	L	D	R	Y	H
Template Known Secondary structure						S	S	S								.	.	.		T	T	S	S														T	T	T											S	S	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G	T
Template Predicted Secondary structure																.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																.	.	.	.	.	150	.	.	.	.	.
		119	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		A	P	V	A	V	S	P	V	R	.	.	.	.	.	.	.	S	D	A	V	K	A	I	L	A	Q	H	P	D	V	Q	I	I	V	T	D
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.											.	.
Template Conservation																												.	.
Template Sequence		I	E	V	F	G	N	P	Q	E	K	D	A	I	K	L	A	K	E	G	V	D	Y	F	K	S	K	.	.	G	V	D	I	I	I	V	D
Template Known Secondary structure								T	T																		T	.	.	T		S
Template Predicted Secondary structure																												.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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