Job Description P27300 Confidence 63.82% Date Thu Jan 5 11:43:46 GMT 2012 Rank 186 Aligned Residues 208 % Identity 14% Template c3bxzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:preprotein translocase subunit seca; PDBTitle: crystal structure of the isolated dead motor domains from2 escherichia coli seca Resolution 3.00 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	G	K	T	P	V	V	V	W	L	V	E	Q	L	Q	Q	R	G	I	R	V	G	V	V	S	R	G	Y	G	G	K	A	E	S	Y	P	L	L	L	S	A	D	T	T	T	A	Q	A	G	D	E	P	V	L	I	Y	Q	R	T	D	A	P	V	A	V	S	P	V	R	S	D	A	V	K	A	I	L	A	Q
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	G	K	T	L	T	A	T	L	P	A	Y	L	N	A	L	T	G	K	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	V	T	V	N	D	Y	L	A	Q	R	D	A	E	N	N	R	P	L	F	E	F	L	G	L	T	V	G	I	N	L	P	G	M	P	A	P	A	K	R	E	A	Y
Template Known Secondary structure		T	S						T								T	T	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S										T	T							T	T								T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.															.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		138	.	140	.	.	.	.	.	.	.	.	.	150														.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		H	P	D	V	Q	I	I	V	T	D	D	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	Y	R	L	A	R	D	V	E	I	V	V	I	D	G	V	R	R	F	.	.	.	.	G	N	G	W	W	L	P	A	G	P	M	R	E	R	A	G	R	L	K	S	V	D	A	V	I	V	N	G	G	V
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	A	A	D	I	T	Y	G	T	N	N	E	Y	G	F	D	Y	L	R	D	N	M	A	F	S	P	E	E	R	V	Q	R	K	L	H	Y	A	L	V	D	E	V	D	S	I	L	I	D	E	A	R	T	P	L	I	I	L	A	S	I	T	F	Q	N	Y	F	R	L	Y	E	K	L	A	G	M	T	G	T	A
Template Known Secondary structure		.	.		S	S																		T		S	S	G	G	G					S								T						T	G	G	G	S												G	G	G	G	G	G	S	S							S
Template Predicted Secondary structure		.	.
Template SS confidence
				171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																											230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		P	R	S	G	E	I	P	M	H	L	L	P	G	Q	A	V	N	L	R	T	G	T	R	C	D	V	A	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	V	V	A	M	A	.	G	I	G	H	P	P	R	F	F	A	T	L	K	M	C	G	V
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		D	T	E	A	F	E	F	S	S	I	Y	K	L	D	T	V	V	V	P	T	N	R	P	M	I	R	K	D	L	P	D	L	V	Y	M	T	E	A	E	K	I	Q	A	I	I	E	D	I	K	E	R	T	A	K	G	Q	P	V	L	V	G	T	I	S	I	E	K	S	E	L	V	S	N	E	L	T	K	A	G	I
Template Known Secondary structure		S	T	T	T	T						S										S	S													S	S																			T								S	S														T	S
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		Q	P	E	K	C	V	P	L	A	D	H	Q	S	L	N	H	A	D	V	S	A	L	.	.	.	V	S	A	G	Q	T	L	V	M	T	E
Query Conservation																								.	.	.
Alig confidence			.	.	.	.	.																	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		K	.	.	.	.	.	H	N	V	L	N	A	K	F	H	A	N	E	A	A	I	V	A	Q	A	G	Y	P	A	A	V	T	I	A	T	N
Template Known Secondary structure			.	.	.	.	.						S	S										T	T	T	T	S	S	S							T
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		475						.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions