Job Description P27300 Confidence 97.21% Date Thu Jan 5 11:43:46 GMT 2012 Rank 6 Aligned Residues 131 % Identity 24% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		P	L	S	W	L	Y	G	L	V	S	G	A	I	R	L	C	Y	K	L	K	L	K	R	A	W	R	A	P	V	P	.	.	V	V	V	V	G	N	L	T	A	G	G	N	G	K	T	P	V	V	V	W	L	V	E	Q	L	Q	Q	R	G	I	R	V	G	V	V	S	R	G	Y	G	G	K	A	E	S	Y	P	L
Query Conservation																																.	.
Alig confidence																																.	.					.	.																																								.	.	.
Template Conservation																																						.	.																																								.	.	.
Template Sequence		S	G	S	E	I	K	D	A	L	K	E	S	V	L	E	M	L	A	K	S	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	.	.	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	.	.	.
Template Known Secondary structure		S																						S					S	S	S							.	.				T	T	S																T	T											S						.	.	.
Template Predicted Secondary structure																																						.	.																																								.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.																					.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.																					.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	S	A	D	T	T	T	A	Q	A	G	D	E	P	V	L	I	Y	Q	R	T	D	A	P	V	A	V	S	P	V	R	.	.	.	.	.	.	S	D	A	V	K	A	I	L	A	Q	H	P	D	V	Q	I	I	V	T	D	.	D	G	L	Q	H	Y	R	L	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.																					.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.											.	.									.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	.	.	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.											T																									T	.	.	T		S										S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Template SS confidence
														209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
									157	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	R	D	V	E	I	V	V	I	D	G	V
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N
Template Known Secondary structure			T	T	S	T	T			S								G	G
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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