Job Description P27300 Confidence 55.55% Date Thu Jan 5 11:43:46 GMT 2012 Rank 243 Aligned Residues 33 % Identity 15% Template c2zamA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b; PDBTitle: crystal structure of mouse skd1/vps4b apo-form Resolution 3.50 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	G	K	T	P	V	V	V	W	L	V	E	Q	L	Q	Q	R	G	I	R	V	G	V	V	S	R	G	Y	G	G	K	A	E	S
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		G	T	G	K	S	Y	L	A	K	A	V	A	T	E	A	N	N	.	.	S	T	F	F	S	I	S	S	S	D	L	V	S	S	E	K
Template Known Secondary structure		T	S													T	T	T	.	.									S	T	T	T				T
Template Predicted Secondary structure																			.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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