Return to main results Retrieve Phyre Job Id

Job DescriptionP27300
Confidence97.04%DateThu Jan 5 11:43:46 GMT 2012
Rank10Aligned Residues133
% Identity22%Templatec2qy9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  LYGLVSGAIRLCYKLKLKRAWRAPVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADT
Query Conservation 

      
   
  
       


















 
  

  
   
    






         
    
Alig confidence 






































































.........
Template Conservation      
   
   
               

  

  
 




 



      
  
 

  
  
  
 .........
Template Sequence  LYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAV. . . . . . . . .
Template Known Secondary structure  TT






S
TT

TTS
TTT




TT
.........
Template Predicted Secondary structure 




























.........
Template SS confidence 















































































   267..270.........280.........290.........300.........310.........320.........330.......
 
   102.......110.........120.........130...... ...140....... ..150......
Predicted Secondary structure 









.....






.








...................
Query SS confidence 


































. . . . .










.








. . . . . . . . . . . . . . . . . . .
Query Sequence  TTAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILA. . . . . QHPDVQIIVTD. DGLQHYRLA. . . . . . . . . . . . . . . . . . .
Query Conservation       



 


     

 
  

  
   
  .....     





.




  
 ...................
Alig confidence  ......




























.....










.








...................
Template Conservation  ...... 

   
    
                 
         
 







      
  

  
           
Template Sequence  . . . . . . EQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEA
Template Known Secondary structure  ......TT



STT

TT
S




GGGTTT
TT
Template Predicted Secondary structure  ......

























Template SS confidence 















































































   338.340.........350.........360.........370.........380.........390.........400.........410.
 
   157..160.........
Predicted Secondary structure 





Query SS confidence 












Query Sequence  RDVEIVVIDGVRR
Query Conservation 

  





   
Alig confidence 












Template Conservation 
    


 
   
Template Sequence  PHEVMLTIDASTG
Template Known Secondary structure 
SGGGT
Template Predicted Secondary structure 





Template SS confidence 












   412.......420....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions