Phyre 2 alignment of P77781 with c3esiD

Job Description P77781
Confidence 49.72% Date Thu Jan 5 12:32:47 GMT 2012

Rank 113 Aligned Residues 76

% Identity 9% Template c3esiD_

PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from2 erwinia carotovora subsp. atroseptica. northeast3 structural genomics target ewr179

Resolution 2.50 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence	V	V	L	A	E	S	I	G	S	V	A	G	Y	L	C	T	E	G	E	Q	K	V	V	G	L	E	I	N	A	N	H	V	R	S	A	.	R	E	G	R	V	R	G	V	C	K	P	L	H	L	G	S	R	H	Q	V	W	Q	I	E	I	F	D	E	K	G	R	L	C	C	S	S	R	L	T	T	A	I	L
Query Conservation																																				.
Alig confidence																	.	.																		.
Template Conservation																	.	.
Template Sequence	V	A	Q	L	D	W	V	M	H	Y	A	T	T	V	L	A	.	.	Q	G	W	T	F	L	S	I	E	N	I	K	F	Q	Q	P	I	L	P	G	K	T	L	R	L	V	L	I	W	H	A	G	K	Q	S	L	T	F	S	Y	S	I	L	E	G	D	T	E	R	T	A	S	S	G	K	I	K	L	T	P	I
Template Known Secondary structure															T		.	.	T	T													S				T	T											T	T	T	T											T	T															T
Template Predicted Secondary structure																	.	.
Template SS confidence
	46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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