Job Description P77781 Confidence 99.86% Date Thu Jan 5 12:32:47 GMT 2012 Rank 30 Aligned Residues 127 % Identity 9% Template c3bnvD_ PDB info PDB header:unknown function Chain: D: PDB Molecule:cj0977; PDBTitle: crystal structure of cj0977, a sigma28-regulated virulence protein2 from campylobacter jejuni. Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.						.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																												.
Query SS confidence																	.	.	.	.	.																												.
Query Sequence		K	R	K	I	T	L	E	A	L	N	A	M	G	E	G	.	.	.	.	.	N	M	V	G	F	L	D	I	R	F	E	H	I	G	D	D	T	L	E	A	T	M	P	V	D	S	R	.	T	K	Q	P	F	G	L	L	H	G	G	A	S	V	V	L	A	E	S	I	G	S	V	A	G	Y	L	C	T	E	G	E
Query Conservation																	.	.	.	.	.																												.
Alig confidence																	.	.	.	.	.																												.																										.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		E	E	Y	A	S	A	E	D	I	S	R	V	R	A	E	L	L	T	C	P	E	L	N	T	S	L	A	G	T	I	I	E	I	D	K	N	Y	A	K	S	I	L	I	T	T	S	E	X	V	A	D	D	Q	G	L	I	F	D	A	F	I	F	A	A	A	N	Y	V	A	Q	A	S	I	.	.	.	.	.	N	K
Template Known Secondary structure		G	G	T	S														S		T	T														T	T										G	G	G	B	S	S	T	T		B	B		T																.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																			.															.
Query SS confidence																			.															.
Query Sequence		Q	K	V	V	G	L	E	I	N	A	N	H	V	R	S	A	R	.	E	G	R	V	R	G	V	C	K	P	L	H	L	G	.	S	R	H	Q	V	W	Q	I	E	I	F	D	E	K	G	R	L	C	C	S	S	R	L	T	T	A	I	L
Query Conservation																			.															.
Alig confidence																			.															.														.
Template Conservation																																																.
Template Sequence		E	F	S	V	I	I	G	S	K	C	F	F	Y	A	P	L	K	L	G	D	V	L	E	L	E	A	H	A	L	F	D	E	T	S	K	K	R	D	V	K	V	V	G	H	V	K	.	E	I	K	X	F	E	G	T	I	Q	V	V	S	T
Template Known Secondary structure		S	S												S			B	T	T													S	S		S											T	.	T
Template Predicted Secondary structure																																																.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions