 |
Job Description | P77781 | Confidence | 98.58% | Date | Thu Jan 5 12:32:47 GMT 2012 |
Rank | 47 | Aligned Residues | 97 |
% Identity | 14% | Template | c3bbjA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:putative thioesterase ii; |
PDBTitle: crystal structure of a putative thioesterase ii (tfu_2367) from2 thermobifida fusca yx at 2.45 a resolution
|
Resolution | 2.16 Å |
|
 |
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | F | E | H | I | G | D | D | T | L | E | A | T | M | P | V | D | S | R | T | K | Q | P | F | G | L | L | H | G | G | A | S | V | V | L | A | E | S | I | G | S | V | A | G | Y | L | C | T | E | G | E | Q | K | V | V | G | L | E | I | N | A | N | H | V | R | S | A | R | E | G | R | V | R | G | V | C | K | P | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . |
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |   | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
T | E | V | V | R | V | G | E | N | R | Y | A | V | E | L | D | P | G | . |
. |
. |
Y | L | I | G | T | A | X | N | G | G | Y | L | X | T | V | L | . |
. |
. |
. |
. |
. |
. |
Q | R | S | A | L | A | E | S | D | H | L | H | A | V | S | S | S | Y | H | F | H | R | P | A | S | S | G | P | A | E | I | E | T | R | V | L |
Template Known Secondary structure |   |
T |
|  |  |  |  |  | T | T |  |  |  |  |  |  |
| G | G | . | . | . | G | B | S | S | S | S | B |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  | T |
| S | S | S |  |  |  |  |  |  |  |  |  |
| S |
|
|
| S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | L | G | S | R | H | Q | V | W | Q | I | E | I | F | D | E | K | G | R | L | C | C | S | S | R | L | T | T |
Query Conservation |   |
  |   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|
|
|
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|   |   |   |
|   |
|   |
| . |   |
|   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
K | R | G | R | T | V | T | T | V | Q | T | T | L | F | Q | . |
E | G | R | T | I | L | T | G | T | L | A | T |
Template Known Secondary structure |   |
 |
|
| S | S |
|  |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
. | . | . | . | 100 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|