Job Description P0ACQ0 Confidence 95.25% Date Thu Jan 5 11:18:41 GMT 2012 Rank 110 Aligned Residues 220 % Identity 14% Template d1qo0a_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.25

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.										.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.													.	.	.	.	.	.	.	.	.																												.
Query SS confidence																	.	.													.	.	.	.	.	.	.	.	.																												.
Query Sequence		T	I	G	M	L	I	T	A	S	T	N	P	F	Y	S	.	.	E	L	V	R	G	V	E	R	S	C	F	E	.	.	.	.	.	.	.	.	.	R	G	Y	S	L	V	L	C	N	T	E	G	D	E	Q	R	M	N	R	N	L	E	T	L	M	Q	K	.	R	V	D	G	L	L	L	L	C	T	E	T	H	Q
Query Conservation																	.	.													.	.	.	.	.	.	.	.	.																												.
Alig confidence																	.	.													.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		L	I	G	L	L	F	S	E	T	G	V	T	A	D	I	E	R	S	Q	R	Y	G	A	L	L	A	V	E	Q	L	N	R	E	G	G	V	G	G	R	P	I	E	T	L	S	Q	D	P	G	G	D	P	D	R	Y	R	L	C	A	E	D	F	I	R	N	R	G	V	R	F	L	V	G	C	Y	M	S	H	T	R
Template Known Secondary structure									S	S	S	T	T																					T	T		B	T	T	B										T	T																S										S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		P	S	R	E	I	M	Q	R	Y	P	T	V	P	T	V	M	M	D	W	A	P	F	D	G	D	S	D	L	I	.	.	.	Q	D	N	S	L	L	G	G	D	L	A	T	Q	Y	L	I	D	K	G	H	T	R	I	A	C	I	T	G	P	L	D	K	T	P	A	R	L	R	L	E	G	Y	R	A	A	M	K	R
Query Conservation																															.	.	.
Alig confidence																															.	.	.																												.	.
Template Conservation																																																													.	.
Template Sequence		K	A	V	M	P	V	V	E	R	A	D	A	L	L	C	Y	P	T	P	Y	E	G	F	E	Y	S	P	N	I	V	Y	G	G	P	A	P	N	Q	N	S	A	P	L	A	A	Y	L	I	R	H	Y	G	E	R	V	V	F	I	G	.	.	S	D	Y	I	Y	P	R	E	S	N	H	V	M	R	H	L	Y	R	Q
Template Known Secondary structure												T							S									T	T					S			G	G	G	T												S		S							.	.		S	S																T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	N	I	P	D	G	Y	E	V	T	G	D	F	E	F	N	G	G	F	D	A	M	R	Q	L	L	S	H	P	L	R	P	Q	A	V	F	T	G	N	D	A	M	A	V	G	V	Y	Q	A	L	Y	Q	A	E	L	Q	V	P	Q	D	I	A	V	I	G	Y	D	D	I	E	L	A	S	F	M	T	P	P
Query Conservation
Alig confidence																																			.																									.	.
Template Conservation																																			.																									.	.
Template Sequence		H	G	G	T	V	L	E	E	I	Y	I	P	L	Y	P	S	D	D	D	L	Q	R	A	V	E	R	I	Y	Q	A	R	A	D	.	V	V	F	S	T	V	V	G	T	G	T	A	E	L	Y	R	A	I	A	R	R	Y	G	D	.	.	G	R	R	P	P	I	A	S	L	T	T	S	E	A	E	V	A	K	M	E
Template Known Secondary structure		T	T											S	S																	T		S	.								S	T	T														S	.	.	S								S	S							T	T	S
Template Predicted Secondary structure																																			.																									.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions