Job Description P0ACQ0 Confidence 95.12% Date Thu Jan 5 11:18:41 GMT 2012 Rank 118 Aligned Residues 204 % Identity 11% Template c3snrA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: rpd_1889 protein, an extracellular ligand-binding receptor from2 rhodopseudomonas palustris. Resolution 1.49 Å

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		57	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure														.	.																				.	.	.																													.
Query SS confidence														.	.																				.	.	.																													.
Query Sequence		N	Q	T	H	T	I	G	M	L	I	T	A	.	.	S	T	N	P	F	Y	S	E	L	V	R	G	V	E	R	S	C	F	E	.	.	.	R	G	Y	S	L	V	L	C	N	T	E	G	D	E	Q	R	M	N	R	N	L	E	T	L	M	Q	K	R	.	V	D	G	L	L	L	L	C	T	E	T	H	Q	P	S
Query Conservation														.	.																				.	.	.																													.
Alig confidence														.	.																				.	.	.																													.
Template Conservation
Template Sequence		T	N	E	I	T	V	G	I	S	V	T	T	T	G	P	A	A	A	L	G	I	P	E	R	N	A	L	E	F	V	V	K	E	I	S	G	H	P	I	K	I	I	V	L	D	D	G	G	D	P	T	A	A	T	T	N	A	R	R	F	V	T	E	S	K	A	D	V	I	X	G	S	S	V	T	P	P	S	V	A
Template Known Secondary structure														S	S	T	T										G	G	G	G	S		S			T	T											T	T															T	S			S						S	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		R	E	I	M	Q	R	Y	P	T	V	P	T	V	M	M	D	W	A	P	F	.	.	.	.	D	G	D	S	D	L	I	Q	D	N	S	L	L	G	G	D	L	A	T	Q	Y	L	I	D	K	G	H	T	R	I	A	C	I	T	G	P	L	D	K	T	P	A	R	L	R	L	E	G	Y	R	A	A	M	K	R	A
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.																																			.	.
Template Conservation																																																												.	.
Template Sequence		I	S	N	V	A	N	E	A	Q	I	P	H	I	A	L	A	P	L	P	I	T	P	E	R	A	K	W	S	V	V	X	P	Q	P	I	P	I	X	G	K	V	L	Y	E	H	X	K	K	N	N	V	K	T	V	G	Y	I	G	.	.	Y	S	D	S	Y	G	D	L	W	F	N	D	L	K	K	Q	G	E	A	X
Template Known Secondary structure										T						S	S						T	T	T	T	T	T					S																	T	T									.	.		S	S																	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	N	I	P	D	G	Y	E	V	T	G	D	F	E	F	N	G	G	F	D	A	M	R	Q	L	L	S	H	P	L	R	P	Q	A	V	F	T	G	N	D	A	M	A	V	G	V	Y	Q	A	L	Y	Q	A	E	L	Q	V	P
Query Conservation
Alig confidence																						.	.											.
Template Conservation																						.	.											.
Template Sequence		G	L	K	I	V	G	E	E	R	F	A	R	P	D	T	S	V	A	G	Q	.	.	A	L	K	L	V	A	A	N	P	D	.	A	I	L	V	G	A	S	G	T	A	A	A	L	P	Q	T	T	L	R	E	R	G	Y	N	G	L
Template Known Secondary structure		T											T	T		S						.	.										S	.																					T	T			S
Template Predicted Secondary structure																						.	.											.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions