Job Description P0ACQ0 Confidence 93.03% Date Thu Jan 5 11:18:41 GMT 2012 Rank 173 Aligned Residues 67 % Identity 15% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	K	D	V	A	R	L	A	G	V	S	T	S	T	V	S	H	V	I	N	K	D	R	F	V	S	E	A	I	T	A	K	V	E	A	A	I	K	E	L	N	Y	A	P	S	A	L	A	R	S	L	K	L	N	Q	T	H	T	I	G	M	L	I	T	A	S	T	N	P	F	Y	S	E	L	V	R	G	V	E
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence		D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	V	Q	R	S	V	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	E	K	E	I	L	Q	R	.	.	.	S	Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I	Y	S	K	N	Q	I	R	N	I	I	Q	K	I	V	Q
Template Known Secondary structure										T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S				.	.	.						T	T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		83	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	C	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	W	A	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions