Job Description P0ACQ0 Confidence 99.90% Date Thu Jan 5 11:18:41 GMT 2012 Rank 64 Aligned Residues 263 % Identity 11% Template c3o1hB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:periplasmic protein tort; PDBTitle: crystal structure of the tors sensor domain - tort complex in the2 presence of tmao Resolution 3.10 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		H	T	I	G	M	L	I	T	A	S	T	N	P	F	Y	S	E	L	V	R	G	V	E	R	S	C	F	E	R	G	Y	S	L	V	L	C	N	T	E	.	.	G	D	E	Q	R	M	N	R	N	L	E	T	L	M	Q	K	R	V	D	G	L	L	L	L	C	T	E	T	H	Q	P	S	R	E	I	M	Q	R	Y
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		E	K	I	C	A	I	Y	P	H	L	K	D	S	Y	W	L	S	V	N	Y	G	M	V	S	E	A	E	K	Q	G	V	N	L	R	V	L	E	A	G	G	Y	P	N	K	S	R	Q	E	Q	Q	L	A	L	C	T	Q	W	G	A	N	A	I	I	L	G	T	V	D	P	H	A	Y	E	H	N	L	K	S	W	V
Template Known Secondary structure									S				S																	T	T									S	S	T	T															T	T		S							S	S	T	T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																				.	.	.	.	.	.																													.
Query SS confidence																				.	.	.	.	.	.																													.
Query Sequence		P	T	V	P	T	V	M	M	D	W	A	P	F	D	G	D	S	D	.	.	.	.	.	.	L	I	Q	D	N	S	L	L	G	G	D	L	A	T	Q	Y	L	I	D	K	G	H	T	R	I	A	C	I	.	T	G	P	L	D	K	T	P	A	R	L	R	L	E	G	Y	R	A	A	M	K	R	A	G	L	N	I
Query Conservation																				.	.	.	.	.	.																													.
Alig confidence																				.	.	.	.	.	.																													.																								.	.
Template Conservation																																																																														.	.
Template Sequence		G	N	T	P	V	F	A	T	V	N	Q	L	D	L	D	E	E	Q	S	T	L	L	K	G	E	V	G	V	D	W	Y	W	M	G	Y	E	A	G	K	Y	L	A	E	R	H	P	K	G	S	G	K	T	N	I	A	L	L	L	G	P	R	T	K	P	V	T	T	G	F	Y	E	A	I	K	N	S	.	.	D	I
Template Known Secondary structure		T	T							S	S						T	T	T	T	T	S									T															S		T	T	S																									S	S	S	.	.	S
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		P	D	G	Y	E	V	T	G	D	F	E	F	N	G	G	F	D	A	M	R	Q	L	L	S	H	P	L	R	P	Q	A	V	F	T	G	N	D	A	M	A	V	G	V	Y	Q	A	L	Y	Q	A	E	L	Q	V	P	Q	D	I	A	V	I	G	Y	D	D	I	E	L	A	S	F	.	.	.	M	T	P	P	L	T
Query Conservation																																																																									.	.	.
Alig confidence																												.	.																										.	.																	.	.	.
Template Conservation																												.	.																										.	.
Template Sequence		H	I	V	D	S	F	W	A	D	N	D	K	E	L	Q	R	N	L	V	Q	R	V	I	D	M	G	.	.	N	I	D	Y	I	V	G	S	A	V	A	I	E	A	A	I	S	E	L	R	S	A	D	K	T	.	.	H	D	I	G	L	V	S	V	Y	L	S	H	G	V	Y	R	G	L	L	R	N	K	V	L	F
Template Known Secondary structure											S															T		.	.			S																			T	S		T	.	.	T	T	S					S	S			T	T							T	T	S			B
Template Predicted Secondary structure																												.	.																										.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	H	Q	P	K	D	E	L	G	E	L	A	I	D	V	L	I	H	R	I	T	Q	P	T	L	Q	Q	Q	R	L	Q	L	T	P	I	L	M	E	R	G	S
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		A	P	T	D	K	M	V	Q	Q	G	R	L	S	V	M	Q	A	A	H	Y	L	R	H	Q	P	Y	E	K	.	Q	A	S	P	I	I	K	P	L	T	P	K	T
Template Known Secondary structure																							T	T					T	.											G	G	G
Template Predicted Secondary structure																														.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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