Job Description P0ACQ0 Confidence 99.97% Date Thu Jan 5 11:18:41 GMT 2012 Rank 40 Aligned Residues 253 % Identity 21% Template c3jvdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcription regulation repressor (laci2 family) from corynebacterium glutamicum Resolution 2.30 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	T	I	G	M	L	I	T	A	S	T	N	P	F	Y	S	E	L	V	R	G	V	E	R	S	C	F	E	R	G	Y	S	L	V	L	C	N	T	E	G	D	E	Q	R	M	N	R	N	L	E	T	L	M	Q	K	R	V	D	G	L	L	L	L	C	T	E	T	H	Q	P	S	R	E	I	M	Q	R	Y	P
Query Conservation
Alig confidence																																										.																													.	.	.	.	.	.	.	.
Template Conservation																																										.																													.	.	.	.	.	.	.	.
Template Sequence		S	A	L	V	G	V	I	V	P	D	L	S	N	E	Y	Y	S	E	S	L	Q	T	I	Q	Q	D	L	K	A	A	G	Y	Q	M	L	V	A	E	A	N	.	S	V	Q	A	Q	D	V	V	M	E	S	L	I	S	I	Q	A	A	G	I	I	H	V	P	V	V	G	S	.	.	.	.	.	.	.	.	I	A	E
Template Known Secondary structure										S		S	S	S																		T										.	S															T		S								T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.																													.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	P	T	V	M	M	D	W	A	P	F	D	G	D	S	D	L	I	Q	D	N	S	L	L	G	G	D	L	A	T	Q	Y	L	I	D	K	G	H	T	R	I	A	C	I	T	G	P	L	D	K	T	P	A	R	L	R	L	E	G	Y	R	A	A	M	K	R	A	G	L	N	I	P	D	G	Y	E	V	T	G
Query Conservation
Alig confidence												.	.	.	.																																																										.	.	.
Template Conservation												.	.	.	.																																																										.	.	.
Template Sequence		G	I	P	M	V	Q	L	T	R	P	.	.	.	.	G	F	P	R	V	L	C	D	D	E	A	G	F	F	Q	L	T	E	S	V	L	G	G	S	G	M	N	I	A	A	L	V	G	E	E	S	L	S	T	T	Q	E	R	M	R	G	I	S	H	A	A	S	I	Y	G	A	E	.	.	.	V	T	F	H	F	G
Template Known Secondary structure			S									.	.	.	.		S																					S	S	S								S		T	T	S																	T	T			.	.	.
Template Predicted Secondary structure												.	.	.	.																																																										.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	E	F	N	G	G	F	D	A	M	R	Q	L	L	S	H	P	L	R	P	Q	A	V	F	T	G	N	D	A	M	A	V	G	V	Y	Q	A	L	Y	Q	A	E	L	Q	V	P	Q	D	I	A	V	I	G	Y	D	D	I	E	L	A	S	F	M	T	P	P	L	T	T	I	H	Q	P	K	D	E	L	G	E
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		H	Y	S	V	E	S	G	E	E	M	A	Q	V	V	F	N	.	N	G	L	P	D	A	L	I	V	A	S	P	R	L	M	A	G	V	M	R	A	F	T	R	L	N	V	R	V	P	H	D	V	V	I	G	G	Y	D	D	P	E	W	Y	S	F	V	G	A	G	I	T	T	F	V	P	P	H	E	E	M	G	K
Template Known Secondary structure			S	S														.	T				S																				T	T			T	T	T	T							S			G	G	G	G	G	S	T	T	S
Template Predicted Secondary structure																		.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	D	V	L	I	H	R	I	T	Q	P	T	L	Q	Q	Q	R	L	Q	L	T	P	I	L	M	E	R	G	S	A
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		E	A	V	R	L	L	V	D	L	I	E	N	P	.	.	E	T	G	D	V	V	L	Q	G	Q	V	I	L	R	G	S	S
Template Known Secondary structure													S		.	.															G	G	G
Template Predicted Secondary structure															.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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