Job Description P0ACQ0 Confidence 99.98% Date Thu Jan 5 11:18:41 GMT 2012 Rank 39 Aligned Residues 258 % Identity 22% Template c3huuC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcription regulator like protein; PDBTitle: crystal structure of transcription regulator like protein from2 staphylococcus haemolyticus Resolution 1.95 Å

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		58	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		Q	T	H	T	I	G	M	L	I	T	A	.	.	.	.	.	S	T	N	P	F	Y	S	E	L	V	R	G	V	E	R	S	C	F	E	R	G	Y	S	L	V	L	C	N	T	E	G	D	E	Q	R	M	N	R	N	L	E	T	L	M	Q	K	R	V	D	G	L	L	L	L	C	T	E	T	H	Q	P	S	R	E
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.
Template Conservation
Template Sequence		K	T	L	T	I	G	L	I	Q	K	S	S	A	P	E	I	R	Q	N	P	F	N	S	D	V	L	N	G	I	N	Q	A	C	N	V	R	G	Y	S	T	R	M	T	V	S	E	N	S	G	D	L	Y	H	E	V	K	T	M	I	Q	S	K	S	V	D	G	F	I	L	L	Y	S	L	K	D	D	P	I	E	H
Template Known Secondary structure											S								T	S																	T	T									S	S														T	T			S					S	S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	Q	R	Y	P	T	V	P	T	V	M	M	D	W	A	P	F	D	G	D	S	D	L	I	Q	D	N	S	L	L	G	G	D	L	A	T	Q	Y	L	I	D	K	G	H	T	R	I	A	C	I	T	G	P	L	D	K	T	P	A	R	L	R	L	E	G	Y	R	A	A	M	K	R	A	G	L	N	I	P	D
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		L	L	N	E	F	K	.	V	P	Y	L	I	V	G	K	S	L	N	Y	E	N	I	I	H	I	D	N	D	N	I	D	A	A	Y	Q	L	T	Q	Y	L	Y	H	L	G	H	R	H	I	L	F	L	Q	E	S	G	H	Y	A	V	T	E	D	R	S	V	G	F	K	Q	Y	C	D	D	V	K	I	S	N	D	C
Template Known Secondary structure						T	T	.							S				S		S	S																							T										S	S		B																	T	T
Template Predicted Secondary structure								.
Template SS confidence
		99	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	E	V	T	G	D	F	E	F	N	G	G	F	D	A	M	R	Q	L	L	S	H	P	L	R	P	Q	A	V	F	T	G	N	D	A	M	A	V	G	V	Y	Q	A	L	Y	Q	A	E	L	Q	V	P	Q	D	I	A	V	I	G	Y	D	D	I	E	L	A	S	F	M	T	P	P	L	T	T	I	H	Q	P
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.
Template Sequence		V	V	I	K	S	M	N	.	.	.	.	.	.	.	.	.	D	L	R	D	F	I	K	Q	Y	M	P	S	V	I	I	T	S	D	V	M	L	N	M	Q	L	L	N	V	L	Y	E	Y	Q	L	R	I	P	E	D	I	Q	T	A	T	F	N	T	S	F	L	T	E	N	A	T	P	S	Q	T	S	V	N	I	N
Template Known Secondary structure						S			.	.	.	.	.	.	.	.	.							T	T				S					S	S														T	T			T	T	T	T							S		S					T	S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.										.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	E	L	G	E	L	A	I	D	V	L	I	H	R	I	T	Q	P	T	L	Q	Q	Q	R	L	Q	L	T	P	I	L	M	E	R	G	S
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		P	D	V	L	G	F	T	A	G	N	T	I	I	D	V	L	R	N	F	.	.	.	.	R	E	K	L	I	S	T	Q	I	V	E	R	V	S
Template Known Secondary structure																	T	T			.	.	.	.													T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions