Job Description P0ACQ0 Confidence 100.00% Date Thu Jan 5 11:18:41 GMT 2012 Rank 12 Aligned Residues 267 % Identity 26% Template c3h5oB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator gntr; PDBTitle: the crystal structure of transcription regulator gntr from2 chromobacterium violaceum Resolution 2.30 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	I	G	M	L	I	T	A	S	T	N	P	F	Y	S	E	L	V	R	G	V	E	R	S	C	F	E	R	G	Y	S	L	V	L	C	N	T	E	G	D	E	Q	R	M	N	R	N	L	E	T	L	M	Q	K	R	V	D	G	L	L	L	L	C	T	E	T	H	Q	P	S	R	E	I	M	Q	R	Y	P	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	V	L	V	L	I	P	S	L	A	N	T	V	F	L	E	T	L	T	G	I	E	T	V	L	D	A	A	G	Y	Q	X	L	I	G	N	S	H	Y	D	A	G	Q	E	L	Q	L	L	R	A	Y	L	Q	H	R	P	D	G	V	L	I	T	G	L	S	H	A	E	P	F	E	R	I	L	S	Q	H	A	L
Template Known Secondary structure									S		S	T	T		T	T														T	T									T	T														T	T			S						S	S				T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		V	P	T	V	M	M	D	W	A	P	F	D	G	D	S	D	L	I	Q	D	N	S	L	L	G	G	D	L	A	T	Q	Y	L	I	D	K	G	H	T	R	I	A	C	I	T	G	P	L	D	K	T	P	A	R	L	R	L	E	G	Y	R	A	A	M	K	R	A	G	L	N	I	P	D	.	G	Y	E	V	T	G
Query Conservation																																																																											.
Alig confidence										.	.																																								.																								.
Template Conservation										.	.																																								.
Template Sequence		P	V	V	Y	X	X	D	L	.	.	A	D	D	G	R	C	C	V	G	F	S	Q	E	D	A	G	A	A	I	T	R	H	L	L	S	R	G	K	R	R	I	G	F	L	G	A	Q	L	D	.	E	R	V	X	K	R	L	D	G	Y	R	A	A	L	D	A	A	D	C	R	D	A	G	L	E	W	L	D	P	Q
Template Known Secondary structure								S		.	.		S	S	S																						T	T			S							S			.																		T				G	G	G						S
Template Predicted Secondary structure										.	.																																								.
Template SS confidence
		151	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	E	F	N	G	G	F	D	A	M	R	Q	L	L	S	H	P	L	R	P	Q	A	V	F	T	G	N	D	A	M	A	V	G	V	Y	Q	A	L	Y	Q	A	E	L	Q	V	P	Q	D	I	A	V	I	G	Y	D	D	I	E	L	A	S	F	M	T	P	P	L	T	T	I	H	Q	P	K	D	E	L	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	S	X	Q	X	G	A	D	X	L	D	R	A	L	A	E	R	P	D	C	D	A	L	F	C	C	N	D	D	L	A	I	G	A	L	A	R	S	Q	Q	L	G	I	A	V	P	E	R	L	A	I	A	G	F	N	D	L	Q	P	A	A	W	C	T	P	P	L	T	T	V	A	T	P	R	R	D	I	G	V
Template Known Secondary structure																				T	T							S	S														T	T			T	T	T	T						S	B							T	S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	D	V	L	I	H	R	I	T	Q	P	T	L	Q	Q	Q	R	L	Q	L	T	P	I	L	M	E	R	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	A	K	A	L	L	Q	L	I	D	G	E	E	P	A	S	R	R	A	D	L	G	F	R	L	X	L	R	R	S
Template Known Secondary structure												T	T				S		S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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