Job Description P0ACQ0 Confidence 100.00% Date Thu Jan 5 11:18:41 GMT 2012 Rank 19 Aligned Residues 261 % Identity 29% Template c3egcF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:putative ribose operon repressor; PDBTitle: crystal structure of a putative ribose operon repressor from2 burkholderia thailandensis Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	H	T	I	G	M	L	I	T	A	S	T	N	P	F	Y	S	E	L	V	R	G	V	E	R	S	C	F	E	R	G	Y	S	L	V	L	C	N	T	E	G	D	E	Q	R	M	N	R	N	L	E	T	L	M	Q	K	R	V	D	G	L	L	L	L	C	T	E	T	H	Q	P	S	R	E	I	M	Q	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	N	V	V	G	L	I	V	S	D	I	E	N	V	F	F	A	E	V	A	S	G	V	E	S	E	A	R	H	K	G	Y	S	V	L	L	A	N	T	A	E	D	I	V	R	E	R	E	A	V	G	Q	F	F	E	R	R	V	D	G	L	I	L	A	P	S	E	G	E	H	D	Y	L	R	T	E	L	P	K
Template Known Secondary structure											S		T	T	S																	T	T									T	T															T	T		S								S	S								S	S		T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	V	P	T	V	M	M	D	W	A	P	F	D	G	D	S	D	L	I	Q	D	N	S	L	L	G	G	D	L	A	T	Q	Y	L	I	D	K	G	H	T	R	I	A	C	I	T	G	P	L	D	K	T	P	A	R	L	R	L	E	G	Y	R	A	A	M	K	R	A	G	L	N	I	P	D	G	Y	E	V	T
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		T	.	F	P	I	V	A	V	N	R	E	L	R	I	P	G	C	G	A	V	L	S	E	N	V	R	G	A	R	T	A	V	E	Y	L	I	A	R	G	H	T	R	I	G	A	I	V	G	S	A	G	L	M	T	S	R	E	R	L	K	G	F	R	A	A	M	S	A	A	G	L	P	V	R	Q	E	W	I	A	A
Template Known Secondary structure		T	.	S						S	S					T	T																						T	T			S						S	S	T	T	S																	T	T					G	G	G
Template Predicted Secondary structure			.
Template SS confidence
		146		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	F	E	F	N	G	G	F	D	A	M	R	Q	L	L	S	H	P	L	R	P	Q	A	V	F	T	G	N	D	A	M	A	V	G	V	Y	Q	A	L	Y	Q	A	E	L	Q	V	P	Q	D	I	A	V	I	G	Y	D	D	I	E	L	A	S	F	M	T	P	P	L	T	T	I	H	Q	P	K	D	E	L	G
Query Conservation
Alig confidence				.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.
Template Sequence		N	G	.	.	.	.	.	.	R	D	G	A	I	K	V	L	T	G	A	D	R	P	T	A	L	L	T	S	S	H	R	I	T	E	G	A	M	Q	A	L	N	V	L	G	L	R	Y	G	P	D	V	E	I	V	S	F	D	N	L	P	W	M	A	F	L	D	P	P	L	P	V	V	E	Q	P	T	R	R	I	G
Template Known Secondary structure				.	.	.	.	.	.									T	S	T	T			S					S	S														T	T			B	T	T	T	B						S			G	G	G	G	G	S	S	S
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		231	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	I	D	V	L	I	H	R	I	T	Q	P	T	L	Q	Q	Q	R	L	Q	L	T	P	I	L	M	E
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		Q	E	A	M	R	M	L	I	H	M	I	E	G	T	G	N	A	.	T	E	M	R	L	Q	T	R	F	V	T
Template Known Secondary structure														T	S	S			.
Template Predicted Secondary structure																			.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions