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Job DescriptionP0ACQ0
Confidence100.00%DateThu Jan 5 11:18:41 GMT 2012
Rank17Aligned Residues264
% Identity20%Templatec3e3mA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of a laci family transcriptional2 regulator from silicibacter pomeroyi
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
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Query Sequence  HTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPT
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Template Sequence  GFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHT. EQTIRLLQRAS
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S
SS
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TT
T

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   6970.........80.........90.........100.........110.........120.........130...... ...140.......
 
   140.........150.........160.........170.........180... ......190.........200.........210.. .....
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Query Sequence  VPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRIACI. TGPLDKTPARLRLEGYRAAMKRAGLNIPD. GYEVT
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Template Sequence  IPIVEIWEKPAHPIGHTVGFSNERAAYDMTNALLARGFRKIVFLGEKDDDWTRGAARRAGFKRAMREAGLNPDQEIRLGA
Template Known Secondary structure  S
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SS
SS

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   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  GDFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELG
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Template Sequence  PPLSIEDGVAAAELILQEYPDTDCIFCVSDMPAFGLLSRLKSIGVAVPEQVSVVGFGNFEVSRFASPEISTVRVDPIAIG
Template Known Secondary structure  SS


TT

SST

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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   298.300.........310.........320.........
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Query Sequence  ELAIDVLIHRITQPTLQQQRLQLTPILMERGS
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Template Sequence  RETGSLILRLLDAQ. . . . . HITLPPVLEFRPS
Template Known Secondary structure  T


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TT
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   308.310.........320. ........330....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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