Return to main results Retrieve Phyre Job Id

Job DescriptionP27829
Confidence98.17%DateThu Jan 5 11:44:05 GMT 2012
Rank205Aligned Residues117
% Identity14%Templated7mdha1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10. ........20....... ..30...... ...40.........50.........60.........70
Predicted Secondary structure 

.



.......

......














Query SS confidence 






.















. . . . . . .








. . . . . .

































Query Sequence  TISVIGL. GYIGLPTAAAFASRQK. . . . . . . QVIGVDINQ. . . . . . HAVDTINRGEIHIVEPDLASVVKTAVEGGFLRAS
Query Conservation 

 



.
 

  

  

  
 ....... 
   
   ......  
  
  
     
  
                
Alig confidence 






.















.......








......














..........








Template Conservation 

 



 
 

   
  
    
       

 
 

        
 



 
       .......... 
 
     
Template Sequence  NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLR. . . . . . . . . . EVSIGIDPY
Template Known Secondary structure  TTTSTTTT
TT



GGGTTT
TT..........S
Template Predicted Secondary structure 





















..........


Template SS confidence 















































































   48.50.........60.........70.........80.........90.........100........ .110.......
 
   71........80.........90.. .......100.........110.........120.........130..
Predicted Secondary structure 











......









Query SS confidence 





















. . . . . .







































Query Sequence  TTPVEADAWLIAVPTPFKGDHE. . . . . . PDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEW
Query Conservation       





 
 

      ...... 

  
      
   
    


  


 



  
   
Alig confidence 





















......



























.










Template Conservation 


  








     
 

  

  
  
       
   
 
   





.


    
  
Template Sequence  EVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN. PCNTNALICLK
Template Known Secondary structure  TTT
S






TT

S
TT

SS.S
Template Predicted Secondary structure 



















.
Template SS confidence 



































































   118.120.........130.........140.........150.........160.........170... ......180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions