Return to main results Retrieve Phyre Job Id

Job DescriptionP27829
Confidence98.32%DateThu Jan 5 11:44:05 GMT 2012
Rank177Aligned Residues107
% Identity20%Templated1qp8a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Formate/glycerate dehydrogenases, NAD-domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWL
Query Conservation 
 
 

 




 

  

  

  
  
   
     
  
  
     
  
                     




Alig confidence 



































......................





















Template Conservation 
 
  




 
 

  

  
   
  
    
  ......................          
 


  



 
Template Sequence  IQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTP. . . . . . . . . . . . . . . . . . . . . . KEGPWRFTNSLEEALREARAAV
Template Known Secondary structure 
TT
S
STTT

SS
......................

SSS

BS
STT
S
Template Predicted Secondary structure 













......................











Template SS confidence 















































































   122.......130.........140.........150....... ..160.........170.........
 
   81........90.........100.........110.........120.........130.......
Predicted Secondary structure 




















Query SS confidence 
























































Query Sequence  IAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMR
Query Conservation 
 
 

       

  
      
   
    


  


 



  
   
 
  
Alig confidence 













........


































Template Conservation     
 
  
  

 ........   
  

 

 


 


  

  

  

  
 
Template Sequence  CALPLNKHTRGLVK. . . . . . . . YQHLALXAEDAVFVNVGRAEVLDRDGVLRILKERP
Template Known Secondary structure 



STTTTT
B
........TTS
TT

S
GGGB

T
Template Predicted Secondary structure 









........














Template SS confidence 
























































   180.........190... ......200.........210.........220........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions