 |
Job Description | P27829 | Confidence | 99.88% | Date | Thu Jan 5 11:44:05 GMT 2012 |
Rank | 34 | Aligned Residues | 111 |
% Identity | 26% | Template | d1mv8a3 |
SCOP info | Adenine nucleotide alpha hydrolase-like
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
|
Resolution | 1.55 |
|
 |
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
I | D | Q | V | K | A | A | V | A | D | C | L | A | A | T | D | K | R | A | S | E | L | K | I | A | C | F | G | L | A | F | K | P | N | I | D | D | L | R | E | S | P | A | M | E | I | A | E | L | I | A | Q | W | H | S | G | E | T | L | V | V | E | P | N | I | H | Q | L | P | K | K | L | T | G | L | C | . |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |
|
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|
|   |   |
|
|   |   |
|   |   | . |   |
|
|   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | Q | K | A | F | D | L | I | . |
. |
. |
. |
. |
. |
. |
. |
T | S | H | D | T | R | K | V | G | L | L | G | L | S | F | K | A | G | T | D | D | L | R | E | S | P | L | V | E | L | A | E | M | L | I | G | . |
K | G | Y | E | L | R | I | F | D | R | N | V | E | Y | A | R | V | H | G | A | N | K | E | Y | I | E | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | T | T | S | S |
|
|  |  |  |  |  |
|
| S | S | S | T | T |
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | . | T | T |
|  |  |  |  |  |
|  |  |  |  |  |  | T | T | S | S | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | |
. | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . |
  |
  |   |
|
|
|
|
|
|
|
|
376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
T | L | A | Q | L | D | E | A | L | A | T | A | D | V | L | V | M | L | V | D | H | S | Q | F | K | V | I | N | G | D | N | V | H | Q | Q | Y | V | V | D | A | K | G | V | W |
Query Conservation |   |
. | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |
|
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
Template Sequence |   |
K | I | P | H | V | S | S | L | L | V | S | D | L | D | E | V | V | A | S | S | D | V | L | V | L | G | N | G | D | E | L | F | V | D | L | V | N | K | T | P | S | G | K | K | L | V | D | L | V | G | F | M |
Template Known Secondary structure |   |
T | S |  |  |  |  | T | T | B |
| S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |
| S |
|
| G | G | G |  |  |  |  |  | S |
|
| T | T |
|  |  |  |  | S | S | S |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
372 | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|